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- Lactobacillus mulieris sp. nov., a new species of Lactobacillus delbrueckii groupPublication . Rocha, Joana; Botelho, João; Ksiezarek, Magdalena; Ugarcina Perovic, Svetlana; Machado, Miguel; Carrico, João André; Pimentel, Lígia L.; Salsinha, Sofia; Rodríguez-Alcalá, Luis M.; Pintado, Manuela; Ribeiro, Teresa G.; Peixe, LuísaOne Gram-stain-positive, non-motile, non-spore-forming, catalase-negative, and coccobacilli-shaped strain, designated c10Ua161MT, was isolated from a urine sample from a reproductive-age healthy woman. Comparative 16S rRNA gene sequence analysis indicated that strain c10Ua161MT belonged to the genus Lactobacillus . Phylogenetic analysis based on pheS and rpoA gene sequences strongly supported a clade encompassing strains c10Ua161MT and eight other strains from public databases, distinct from currently recognized species of the genus Lactobacillus. In silico Average Nucleotide Identity (ANI) and Genome-to-Genome Distance Calculator (GGDC), showed 87.9 and 34.3 % identity to the closest relative Lactobacillus jensenii , respectively. The major fatty acids of strain c10Ua161MT were C18 : 1ω9c (65.0%), C16 : 0 (17.8%), and summed feature 8 (10.2 %; comprising C18 : 1ω7c, and/or C18 : 1ω6c). The DNA G+C content of the strains is 34.2 mol%. On the basis of data presented here, strain c10Ua161MT represents a novel species of the genus Lactobacillus , for which the name Lactobacillus mulieris sp. nov. is proposed. The type strain is c10Ua161MT (=CECT 9755T=DSM 108704T).
- Lactobacillus femina sp. nov., a new species of lactobacillus delbrueckii groupPublication . Rocha, Joana; Botelho, João Francisco Tomaz Santos; Ksiezarek, Magdalena; Ribeiro, Teresa Goncalves; Machado, Miguel Paulo; Carrico, Joao Andre; Peixe, Luisa Maria Vieira; Pimentel, Lígia; Salsinha, Ana Sofia; Rodríguez-Alcalá, Luís M.; Pintado, Manuela
- Phylogenetic and clonality analysis of bacillus pumilus isolates uncovered a highly heterogeneous population of different closely related species and clonesPublication . Branquinho, Raquel; Meirinhos-Soares, Luís; Carriço, João A.; Pintado, Manuela; Peixe, Luísa V.Bacillus pumilus is a Gram-positive bacterium with a wide range of attributed applications, namely as a plant growth promoting rhizobacteria (PGPR), animal, and human probiotic. However, a rare putative role in human diseases has been reported, namely in food poisoning or as anthrax-like cutaneous infectious agent. This species is difficult to distinguish from its closely related species on the basis of phenotypic or biochemical characteristics and 16S rRNA gene sequences. In this study, the phylogenetic analysis of gyrB and rpoB gene sequences of a collection of isolates previously identified as B. pumilus, assigned most of them (93%, 38 of 41 isolates) to B. safensis or to the new recently described B. invictae. Moreover, we extended the previously reported recognized habitats of these species and unveiled a human health or biotechnological relevance (e.g. as implicated in food poisoning or PGPR) for them. Additionally, we demonstrated that both B. safensis and B. invictae species encompass a clonally diverse population, which can justify their great adaptation ability to different niches, with evidence of clonal-host specificity