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Oryzisolibacter propanilivorax gen. nov., sp nov., a propanil-degrading bacterium

2017Journal article Restricted access
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dc.contributor.authorVaz-Moreira, Ivone
dc.contributor.authorNarciso-da-Rocha, Carlos
dc.contributor.authorLopes, Ana Rita
dc.contributor.authorCarvalho, Gilda
dc.contributor.authorLobo-da-Cunha, Alexandre
dc.contributor.authorWhitman, William B.
dc.contributor.authorSnauwaert, Cindy
dc.contributor.authorVandamme, Peter
dc.contributor.authorManaia, Célia M.
dc.contributor.authorNunes, Olga C.
dc.date.accessioned2017-12-27T12:53:55Z
dc.date.available2017-12-27T12:53:55Z
dc.date.issued2017
dc.description.abstractStrain EPL6T, a Gram-negative, motile, short rod was isolated from a propanil and 3,4-dichloroaniline enrichment culture produced from rice paddy soil. Based on the analyses of the 16S rRNA gene sequence, strain EPL6T was observed to be a member of the family Comamonadaceae , sharing the highest pairwise identity with type strains of the species Alicycliphilus denitrificans K601T (96.8 %) and Melaminivora alkalimesophila CY1T (96.8 %). Strain EPL6T was able to grow in a temperature range of 15–37 °C, pH 6–9 and in the presence of up to 4 % (w/v) NaCl and tested positive for catalase and oxidase reactions. The major respiratory quinone was Q8. The genomic DNA had a G+C content of 69.4±0.9 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol, and the major fatty acid methyl esters comprised C16 : 0, C18 : 1ω7c and summed feature 3 (C16 : 1ω7c/iso-C15 : 0 2-OH). Comparison of the genome sequence of strain EPL6T and of its closest neighbours, Melaminivora alkalimesophila CY1T and Alicycliphilus denitrificans K601T, yielded values of ANI ≤84.1 % and of AAI ≤80.3 %. Therefore, the genetic, phylogenetic, phenotypic and chemotaxonomic characteristics support the classification of this organism into a new taxon. Considering the genetic divergence of strain EPL6T from the type strains of the closest species, which belong to distinct genera, we propose a new genus within the family Comamonadaceae , named Oryzisolibacter propanilivorax gen. nov., sp. nov., represented by the isolate EPL6T as the type strain of the species (=LMG 28427T=CECT 8927T).pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.citationVaz-Moreira, I., Narciso-da-Rocha, C., Lopes, A., Carvalho, G., Lobo-da-Cunha, A., Whitman, W., Snauwaert, C., Vandamme, P., Manaia, C.M., Nunes, O. (2017). Oryzisolibacter propanilivorax gen. nov., sp nov., a propanil-degrading bacterium. International Journal of Systematic and Evolutionary Microbiology, 67(10), 3752-3758pt_PT
dc.identifier.doi10.1099/ijsem.0.002184pt_PT
dc.identifier.eid85031781579
dc.identifier.eissn1466-5034
dc.identifier.issn1466-5026
dc.identifier.pmid28895512
dc.identifier.urihttp://hdl.handle.net/10400.14/23789
dc.identifier.wos000413484800010
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherMicrobiology Societypt_PT
dc.relationPOCI-01–0145-FEDER-006939-LEPABEpt_PT
dc.relationNEW INSIGHTS INTO THE ENVIRONMENTAL ANTIBIOTIC RESISTOME
dc.relationMOLINATE DEGRADATION PATHWAY IN G. MOLINATIVORAX ON4T: AN OPEN DOOR FOR WHITE BIOTECHNOLOGY
dc.subjectHerbicide degraderpt_PT
dc.subjectRice field soilpt_PT
dc.subjectComamonadaceaept_PT
dc.subjectNew genuspt_PT
dc.titleOryzisolibacter propanilivorax gen. nov., sp nov., a propanil-degrading bacteriumpt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.awardTitleNEW INSIGHTS INTO THE ENVIRONMENTAL ANTIBIOTIC RESISTOME
oaire.awardTitleMOLINATE DEGRADATION PATHWAY IN G. MOLINATIVORAX ON4T: AN OPEN DOOR FOR WHITE BIOTECHNOLOGY
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/5876/UID%2FMulti%2F50016%2F2013/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/SFRH/SFRH%2FBPD%2F87360%2F2012/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT//SFRH%2FBD%2F97131%2F2013/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT//SFRH%2FBPD%2F92894%2F2013/PT
oaire.citation.endPage3758pt_PT
oaire.citation.issue10pt_PT
oaire.citation.startPage3752pt_PT
oaire.citation.titleInternational Journal of Systematic and Evolutionary Microbiologypt_PT
oaire.citation.volume67pt_PT
oaire.fundingStream5876
oaire.fundingStreamSFRH
person.familyNameVaz-Moreira
person.familyNameNarciso-da-Rocha
person.familyNameLopes
person.familyNameCarvalho
person.familyNameLobo-da-Cunha
person.familyNameWhitman
person.familyNameVandamme
person.familyNameManaia
person.familyNameNunes
person.givenNameIvone
person.givenNameCarlos
person.givenNameAna
person.givenNameGilda
person.givenNameAlexandre
person.givenNameWilliam
person.givenNamePeter
person.givenNameCélia
person.givenNameOlga
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project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsrestrictedAccesspt_PT
rcaap.typearticlept_PT
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