Repository logo
 
Publication

Pedobacter lusitanus sp. nov., isolated from sludge of a deactivated uranium mine

2017Journal article Restricted access
Simple item page
dc.contributor.authorCovas, Cláudia
dc.contributor.authorCaetano, Tânia
dc.contributor.authorCruz, Andreia
dc.contributor.authorSantos, Tiago
dc.contributor.authorDias, Liliana
dc.contributor.authorKlein, Guenter
dc.contributor.authorAbdulmawjood, Amir
dc.contributor.authorRodriguez-Alcala, Luis M.
dc.contributor.authorPimentel, Ligia L.
dc.contributor.authorGomes, Ana
dc.contributor.authorFreitas, Ana Cristina
dc.contributor.authorGarcia-Serrano, Alba
dc.contributor.authorFontecha, Javier
dc.contributor.authorMendo, Sonia
dc.date.accessioned2018-11-07T15:58:19Z
dc.date.available2018-11-07T15:58:19Z
dc.date.issued2017
dc.description.abstractStrain NL19(T) is a Gram-stain-negative, aerobic bacterium that was isolated from sludge of a deactivated uranium mine in Portugal. 16S rRNA gene sequence analysis revealed that strain NL19(T) is a member of the genus Pedobacter and closely related to the strains Pedobacter himalayensis MTCC 6384(T), Pedobacter cryoconitis DSM 14825(T), Pedobacter westerhofensis DSM 19036 (T) and Pedobacter hartonius DSM 19033(T). It had a DNA G+C content of 40.8 mol%, which agreed with the genus description. The main fatty acids included C-16 : 1 omega 7c, C-14 : 1 omega 5c, C-4 : 0, iso-C-17 : 0, iso-C-17 : 0 3-OH, C-16 : 0, anteiso-C-15 : 0 and isoC(15 : 0) 3-OH. The main lipids present were phospholipids (60 %) and sphingolipids (35 %). The most abundant phospholipids included phosphatidylethanolamine, phosphatidylinositol and phosphatidylcholine. Menaquinone-7 (MK-7) was the only isoprenoid quinone detected. DNA-DNA hybridization similarities between strain NL19(T) and Pedobacter himalayensis MTCC 6384(T), Pedobacter cryoconitis DSM 14825(T), Pedobacter westerhofensis DSM 19036(T) and Pedobacter hartonius DSM 19033(T) were 15.3, 16.2, 11.5 and 16.0 %, respectively. Strain NL19(T) can also be distinguished from these four species based on gyrB and intergenic transcribed spacers (ITS) sequences and by some phenotypic traits such as NaCl tolerance, pH, growth temperature and carbon source utilization. Strain NL19(T) represents a novel species of the genus Pedobacter, for which the name Pedobacter lusitanus sp. nov. is proposed. The type strain is NL19(T) (= LMG 29220(T) = CECT 9028(T)). An amended description of Pedobacter himalayensis is also included.pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.citationCovas, C., Caetano, T., Cruz, A., Santos, T., Dias, L., Klein, G., ...Mendo, S. (2017). Pedobacter lusitanus sp. nov., isolated from sludge of a deactivated uranium mine. International Journal of Systematic and Evolutionary Microbiology, 67(5), 1339-1348pt_PT
dc.identifier.doi10.1099/ijsem.0.001814pt_PT
dc.identifier.eid85020441779
dc.identifier.eissn1466-5034
dc.identifier.issn1466-5026
dc.identifier.pmid28109203
dc.identifier.urihttp://hdl.handle.net/10400.14/26002
dc.identifier.wos000403696100035
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherMicrobiology Societypt_PT
dc.relationBPD/UI88/2886/2013pt_PT
dc.relationCENTRO-07-ST24-FEDER-002033
dc.relationTWO-COMPONENT LANTIBIOTICS: BIOSYNTHESIS, BIOENGINEERING, MODE OF ACTION AND ANTIBACTERIAL ACTIVITY
dc.relationFIRST INSIGHTS INTO THE BIOSYNTHESIS AND BIOACTIVITY OF BACTEROIDETES LANTHIPEPTIDES
dc.subjectPolyphasic taxonomy
dc.subjectPhospholipids and sphingolipids
dc.subjectAntibacterial activity
dc.subject16S rRNA gene
dc.subjectGyrB
dc.subjectIntergenic transcribed spacer
dc.titlePedobacter lusitanus sp. nov., isolated from sludge of a deactivated uranium minept_PT
dc.typejournal article
dspace.entity.typePublication
oaire.awardTitleTWO-COMPONENT LANTIBIOTICS: BIOSYNTHESIS, BIOENGINEERING, MODE OF ACTION AND ANTIBACTERIAL ACTIVITY
oaire.awardTitleFIRST INSIGHTS INTO THE BIOSYNTHESIS AND BIOACTIVITY OF BACTEROIDETES LANTHIPEPTIDES
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/5876/UID%2FAMB%2F50017%2F2013/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT//SFRH%2FBPD%2F77900%2F2011/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT//SFRH%2FBD%2F98446%2F2013/PT
oaire.citation.endPage1348
oaire.citation.issue5
oaire.citation.startPage1339
oaire.citation.titleInternational Journal of Systematic and Evolutionary Microbiologypt_PT
oaire.citation.volume67
oaire.fundingStream5876
person.familyNameCaetano
person.familyNameSantos
person.familyNameAbdulmawjood
person.familyNameRodríguez-Alcalá
person.familyNamePimentel
person.familyNameGomes
person.familyNameCardoso Freitas Lopes de Freitas
person.familyNameFONTECHA
person.familyNameMendo
person.givenNameTania
person.givenNameTiago
person.givenNameAmir
person.givenNameLuis Miguel
person.givenNameLígia
person.givenNameAna Maria
person.givenNameAna Cristina
person.givenNameJAVIER
person.givenNameSonia
person.identifier275892
person.identifier533800
person.identifier534450
person.identifier162628
person.identifier.ciencia-idC619-14B9-5385
person.identifier.ciencia-id6E14-F8F8-755E
person.identifier.ciencia-id6618-9DD9-3C65
person.identifier.ciencia-idAA12-BFC1-B2E3
person.identifier.ciencia-id7F10-545A-7D05
person.identifier.ciencia-id8A13-DCAA-119D
person.identifier.orcid0000-0001-9157-8761
person.identifier.orcid0000-0003-0193-8597
person.identifier.orcid0000-0001-5189-8381
person.identifier.orcid0000-0002-9367-2177
person.identifier.orcid0000-0002-6656-017X
person.identifier.orcid0000-0001-7883-2446
person.identifier.orcid0000-0002-1430-9370
person.identifier.orcid0000-0001-5719-2304
person.identifier.orcid0000-0001-5057-5660
person.identifier.ridC-8761-2009
person.identifier.ridC-6083-2015
person.identifier.ridJ-3239-2012
person.identifier.ridK-3254-2014
person.identifier.ridB-9944-2013
person.identifier.ridK-7213-2012
person.identifier.ridE-1095-2011
person.identifier.scopus-author-id22633643500
person.identifier.scopus-author-id19337562900
person.identifier.scopus-author-id22035944100
person.identifier.scopus-author-id57190668768
person.identifier.scopus-author-id6505928827
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsrestrictedAccesspt_PT
rcaap.typearticlept_PT
relation.isAuthorOfPublicationb9852b19-7489-4961-b7a3-b84bb3d25d44
relation.isAuthorOfPublication416e23c3-1602-4a62-a182-49db8376db55
relation.isAuthorOfPublication18a90184-5246-464b-bbcb-622d9798e9c5
relation.isAuthorOfPublication08c3247d-66eb-4feb-b6c4-9d88ae85cc85
relation.isAuthorOfPublicationd6520be9-873a-41f9-9aa1-96a5b65e8070
relation.isAuthorOfPublicationc18c2fb1-f3dc-4274-a646-23d456432798
relation.isAuthorOfPublication60894705-709d-4186-9777-ac557e723b83
relation.isAuthorOfPublication1319c0bc-7a62-4ebe-9d40-3dd377e183ac
relation.isAuthorOfPublication88682845-05a0-4650-b659-ca1e0385d3b7
relation.isAuthorOfPublication.latestForDiscoveryc18c2fb1-f3dc-4274-a646-23d456432798
relation.isProjectOfPublicationf7e2530f-03f2-475c-a6a9-f0b7d97f651a
relation.isProjectOfPublication3cfdcee3-d0fd-4b8e-a55f-a74e0432be31
relation.isProjectOfPublicatione744d509-d26b-4281-bcf9-4ec0a03b6c60
relation.isProjectOfPublication.latestForDiscoverye744d509-d26b-4281-bcf9-4ec0a03b6c60

Files

Original bundle
Now showing 1 - 1 of 1
No Thumbnail Available
Name:
19294563.pdf
Size:
279.63 KB
Format:
Adobe Portable Document Format
Download
License bundle
Now showing 1 - 1 of 1
No Thumbnail Available
Name:
license.txt
Size:
3.44 KB
Format:
Item-specific license agreed upon to submission
Description:
Download

Collections

CBQF - Contribuições em Revistas Científicas / Contribution to Journals