CBQF - Livros e Partes de Livros / Books and Books Parts
Permanent URI for this collection
Browse
Browsing CBQF - Livros e Partes de Livros / Books and Books Parts by Subject "Alcaligenaceae"
Now showing 1 - 5 of 5
Results Per Page
Sort Options
- CaenimicrobiumPublication . Manaia, Célia M.; Vaz-Moreira, Ivone; Nunes, Olga Cristina PastorCaenimicrobium [Cae.ni.mi.cro'bi.um, L. neut. n. caenum mud, referring to the isolation of the type strain from activated sludge; N.L. neut. n. microbium microbe (from Gr. adj. mikros small and Gr. n. bios life); N.L. neut. n. Caenimicrobium mud (‐inhabiting) microbe]. Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / Caenimicrobium. Gram‐negative‐staining nonmotile short rods, forming beige colonies on nutrient medium. Mesophilic, aerobic, and catalase‐ and cytochrome c oxidase‐positive. Major polar lipids are phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, and an unidentified phospholipid, and major cellular fatty acids are C16:1 ω7c, C16:0, cyclo C17:0, and C18:1 ω7c. Ubiquinone 8 is the major respiratory quinone. The type and unique species is Caenimicrobium hargitense, represented by the type strain CGII‐59m2T isolated from activated sludge. Caenimicrobium hargitense strain CGII‐59m2T shares 16S rRNA gene sequence similarity >97% with members of the genera Bordetella, Candidimonas, Paracandidimonas, and Parapusillimonas. DNA G + C content (mol%): 62.3 (HPLC method). Type species: Caenimicrobium hargitense, Felföldi et al. 2017VP.
- CandidimonasPublication . Manaia, Célia M.; Vaz-Moreira, Ivone; Nunes, Olga C.Can.di.di.mo'nas. L. masc. adj. candidus white; L. fem. n. monas a unit, monad; N.L. fem. n. Candidimonas a unit (rod) that produces white colonies. Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / CandidimonasRods, non‐spore‐forming, Gram‐stain‐negative. Nonmotile or motile by polar flagella. Aerobic or facultatively aerobic chemoorganotrophic respiratory metabolism. Mesophilic with optimal growth at around 30°C. Growth can occur in the psychrophilic range of 1–5°C. Reacts positively for the catalase and cytochrome c oxidase tests. Sole carbon sources include amino acids and organic acids. Glucose can be oxidized or assimilated but not fermented. Anaerobic growth can be observed in the presence of nitrate. Depending on the species, nitrate is reduced to nitrite or nitrogen. The major respiratory quinone is ubiquinone 8, and the DNA G + C content ranges 62–65 mol%. Fatty acid composition is variable among species, with C16:0 predominating in all species, and C17:0 cyclo, summed feature 3 (C16:1 ω7c and/or iso‐C15:0 2‐OH), C18:1 ω7c, and summed feature 2 (C14:0 3‐OH and/or iso‐C16:1 I) represented among the major components in the validly named species. The polar lipids comprise phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, and some minor unidentified aminophospholipids and aminolipids. Phylogenetically, the genus Candidimonas belongs to the family Alcaligenaceae. The type species is Candidimonas nitroreducens, and the genus includes also Candidimonas humi and Candidimonas bauzanensis.
- ParacandidimonasPublication . Nunes, Olga C.; Manaia, Célia M.; Vaz-Moreira, IvoneParacandidimonas (Pa.ra.can.di.di.mo'nas. Gr. prep. para like; N.L. fem. n. Candidimonas bacterial genus name; N.L. fem. n. Paracandidimonas a bacterium like Candidimonas). Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / Paracandidimonas. Rods, non-spore-forming, and Gram-staining-negative. Aerobic or facultatively aerobic chemoorganotrophic metabolism. Motility and the presence of cytochrome c oxidase test are variable traits. Mesophilic with optimal growth at 20–25°C or 30°C. The major respiratory quinone is ubiquinone 8, and the DNA G + C content is 56.8–63.9 mol%. Putrescine and 2-hydroxyputrescine are the major polyamines. Polar lipids and fatty acids composition is variable among species. Phylogenetically, belongs to the family Alcaligenaceae. The genus includes two species, the type species Paracandidimonas soli and Paracandidimonas caeni. DNA G + C content (mol%): 63.9 (fluorimetric thermal denaturation); 56.8–62.5 (whole-genome sequencing). Type species: Paracandidimonas soli Kämpfer et al. 2017VP
- ParapusillimonasPublication . Durán-Viseras, Ana; Manaia, Célia M.; Vaz-Moreira, Ivone; Nunes, Olga C.Parapusillimonas (Pa.ra.pu.sil.li.mo'nas. Gr. prep. para like; N.L. fem. n. Pusillimonas bacterial genus name; N.L. fem. n. Parapusillimonas a bacterium like Pusillimonas). Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / Parapusillimonas. Gram-staining-negative motile short rods, with three flagella. Facultatively anaerobic. Catalase- and cytochrome c oxidase-positive. Chemoorganotrophic. Sugar, alcohols, organic acids, and amino acids can be used as single carbon sources. Ubiquinone 8 is the major respiratory quinone, and the predominant fatty acids are C16:0, summed feature 3 (C16:1 ω7c/C15:0 iso 2-OH), C17:0 cyclo, and summed feature 5 (C18:1 ω7c/ω9t/ω12t). The major polar lipids are phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol. Putrescine is the major polyamine.DNA G + C content (mol%): 67.9 (HPLC) and 64.6 (genome). Type species: Parapusillimonas granuli Kim et al. 2010VP.
- PusillimonasPublication . Durán-Viseras, Ana; Manaia, Célia M.; Vaz-Moreira, Ivone; Nunes, Olga C.Pusillimonas (Pu.sil.li.mo'nas. L. masc. adj. pusillus very small/minute; Gr. fem. n. monas unit/monad; N.L. fem. n. Pusillimonas very small monad/unicell, referring to the small size of cells and colonies of the type species). Proteobacteria / Betaproteobacteria / Burkholderiales / Alcaligenaceae / Pusillimonas. Rods, Gram-stain-negative, and nonmotile or motile by polar or lateral flagella. Strictly aerobic. The optimal growth temperature range is 30–37°C. Catalase and cytochrome c oxidase tests are positive in most species. The major respiratory quinone is ubiquinone Q-8. The cellular fatty acid composition is characterized by the predominance of C16:0. The other most abundant fatty acids (C17:0 cyclo, C19:0 cyclo ω8c, and C18:0) vary among species. The polar lipids composition comprises phosphatidylglycerol, diphosphatidylglycerol, and phosphatidylethanolamine as well as some unidentified amino- and phospholipids. Phylogenetically, belongs to the family Alcaligenaceae. DNA G + C content (mol%): 53.1–63.3 (Tm/HPLC) and 53.4–63.1 (WGS). Type species: Pusillimonas noertemannii Stolz et al. 2005VP.