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Phylogenetic and clonality analysis of bacillus pumilus isolates uncovered a highly heterogeneous population of different closely related species and clones

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dc.contributor.authorBranquinho, Raquel
dc.contributor.authorMeirinhos-Soares, Luís
dc.contributor.authorCarriço, João A.
dc.contributor.authorPintado, Manuela
dc.contributor.authorPeixe, Luísa V.
dc.date.accessioned2015-05-11T11:04:00Z
dc.date.available2015-05-11T11:04:00Z
dc.date.issued2014
dc.description.abstractBacillus pumilus is a Gram-positive bacterium with a wide range of attributed applications, namely as a plant growth promoting rhizobacteria (PGPR), animal, and human probiotic. However, a rare putative role in human diseases has been reported, namely in food poisoning or as anthrax-like cutaneous infectious agent. This species is difficult to distinguish from its closely related species on the basis of phenotypic or biochemical characteristics and 16S rRNA gene sequences. In this study, the phylogenetic analysis of gyrB and rpoB gene sequences of a collection of isolates previously identified as B. pumilus, assigned most of them (93%, 38 of 41 isolates) to B. safensis or to the new recently described B. invictae. Moreover, we extended the previously reported recognized habitats of these species and unveiled a human health or biotechnological relevance (e.g. as implicated in food poisoning or PGPR) for them. Additionally, we demonstrated that both B. safensis and B. invictae species encompass a clonally diverse population, which can justify their great adaptation ability to different niches, with evidence of clonal-host specificitypor
dc.identifier.citationBRANQUINHO, R… [et al.] - Phylogenetic and clonality analysis of bacillus pumilus isolates uncovered a highly heterogeneous population of different closely related species and clones. FEMS Microbiology Ecology. ISSN 1574-6941. Vol. 90, n.º 3 (2014), p. 689-698por
dc.identifier.doi10.1111/1574-6941.12426
dc.identifier.urihttp://hdl.handle.net/10400.14/17534
dc.identifier.wosWOS:000346057900013
dc.language.isoengpor
dc.peerreviewedyespor
dc.publisherOxford University Press
dc.subjectBacillus pumiluspor
dc.subjectBacillus safensispor
dc.subjectBacillus invictaepor
dc.subjectDiversitypor
dc.subjectgyrB genepor
dc.subjectPFGEpor
dc.titlePhylogenetic and clonality analysis of bacillus pumilus isolates uncovered a highly heterogeneous population of different closely related species and clonespor
dc.typejournal article
dspace.entity.typePublication
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/SFRH/SFRH%2FBD%2F61410%2F2009/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/COMPETE/PEst-C%2FEQB%2FLA0006%2F2013/PT
oaire.citation.endPage698
oaire.citation.issue3
oaire.citation.startPage689
oaire.citation.titleFEMS Microbiology Ecology
oaire.citation.volume90
oaire.fundingStreamSFRH
oaire.fundingStreamCOMPETE
person.familyNameBranquinho
person.familyNameCarrico
person.familyNamePintado
person.familyNamePeixe
person.givenNameFabiana
person.givenNameJoao
person.givenNameMaria Manuela
person.givenNameLuísa
person.identifier391563
person.identifier456608
person.identifier.ciencia-id3510-BBAC-9407
person.identifier.ciencia-id2F13-AAE0-3405
person.identifier.ciencia-id731C-0B6D-8F44
person.identifier.orcid0000-0002-1629-9292
person.identifier.orcid0000-0002-5274-2722
person.identifier.orcid0000-0002-0760-3184
person.identifier.orcid0000-0001-5810-8215
person.identifier.ridC-6789-2019
person.identifier.ridA-7367-2008
person.identifier.ridF-5696-2013
person.identifier.ridH-7347-2016
person.identifier.scopus-author-id55699847900
person.identifier.scopus-author-id8266333200
person.identifier.scopus-author-id7004483898
person.identifier.scopus-author-id6603892851
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsrestrictedAccesspor
rcaap.typearticlepor
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