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Towards a best practice methodology for the detection of Phytophthora species in soils

dc.contributor.authorBurgess, Treena I.
dc.contributor.authorLópez-Villamor, Adrián
dc.contributor.authorPaap, Trudy
dc.contributor.authorWilliams, Briony
dc.contributor.authorBelhaj, Rajah
dc.contributor.authorCrone, Michael
dc.contributor.authorDunstan, William
dc.contributor.authorHoward, Kay
dc.contributor.authorHardy, Giles E. St. J.
dc.date.accessioned2021-02-01T18:34:11Z
dc.date.available2021-02-01T18:34:11Z
dc.date.issued2021
dc.description.abstractThe genus Phytophthora contains species that are major pathogens worldwide, affecting a multitude of plant species across agriculture, horticulture, forestry, and natural ecosystems. Here, we concentrate on those species that are dispersed through soil and water, attacking the roots of the plants, causing them to rot and die. The intention of this study was to compare the soil baiting protocol developed by the Centre for Phytophthora Science and Management (CPSM) with two other baiting methods used in Australia. The aim was to demonstrate the effectiveness of each protocol for soil baiting Phytophthora species in different substrates. Three experiments were conducted: the first to test the sensitivity of each method to detect Phytophthora cinnamomi, the second to test the effect of substrate type (sand or loam), and the third to test the detection of species (P. cinnamomi, P. multivora, or P. pseudocryptogea). The specificity of different plant species baits was compared within and between the methods. Substrate type influenced isolation in all methods; however, the CPSM method was superior regardless of substrate, albeit slower than one of the other methods for one substrate. Comparing bait species between the three methods, Quercus ilex was the most attractive bait for P. cinnamomi, particularly in the CPSM method. The choice of protocol affected the isolation associated with each bait type. Overall, the multiple bait system used by CPSM was shown to provide the most sensitive and reliable detection of Phytophthora species from soil samples.pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.citationBurgess, T. I., López-Villamor, A., Paap, T., Williams, B., Belhaj, R., Crone, M., Dunstan, W., Howard, K., & Hardy, G. E. S. J. (2021). Towards a best practice methodology for the detection of Phytophthora species in soils. Plant Pathology, 70(3), 604-614. https://doi.org/10.1111/ppa.13312pt_PT
dc.identifier.doi10.1111/ppa.13312pt_PT
dc.identifier.eid85096680266
dc.identifier.eissn1365-3059
dc.identifier.urihttp://hdl.handle.net/10400.14/31830
dc.identifier.wos000625157400010
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherBritish Society for Plant Pathologypt_PT
dc.subjectArtificial inoculumpt_PT
dc.subjectNaturalpt_PT
dc.subjectPre-wettingpt_PT
dc.subjectProtocolpt_PT
dc.subjectSoil baitingpt_PT
dc.subjectSoil typept_PT
dc.titleTowards a best practice methodology for the detection of Phytophthora species in soilspt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.citation.titlePlant Pathologypt_PT
person.familyNameBurgess
person.familyNamePaap
person.familyNameHardy
person.givenNameTreena
person.givenNameTrudy
person.givenNameGiles
person.identifier244330
person.identifier.orcid0000-0002-7962-219X
person.identifier.orcid0000-0003-1364-4350
person.identifier.orcid0000-0001-7419-5064
person.identifier.ridG-4770-2011
person.identifier.ridR-4919-2016
person.identifier.scopus-author-id7005669477
person.identifier.scopus-author-id23470389100
rcaap.rightsrestrictedAccesspt_PT
rcaap.typearticlept_PT
relation.isAuthorOfPublication8069ff3a-6fda-4647-8242-499c7f5451a2
relation.isAuthorOfPublication42451342-19fa-49b3-b76f-6cbda089dcbf
relation.isAuthorOfPublicationb5d38e20-0ab7-442c-910e-db94aa7deeb7
relation.isAuthorOfPublication.latestForDiscovery8069ff3a-6fda-4647-8242-499c7f5451a2

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